miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST033561
species: Bos taurus
source: miRBase, original name: bta-mir-2311 (MI0011327)

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTGAAACTGTGCTCGTGGTGT

miRNA*
AGCACGTGGGCTAGTTTCAGAC

mismatches: 5
bulges: 1

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pre-miRNA
GTACTGAAACTGTGCTCGTGGTGTGTGCTGTACAGCACGTGGGCTAGTTTCAGAC

dot-bracket secondary structure
...((((((((((.(.((((.((((.....)))).)))).).)).))))))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM SNORA61: 2e-19

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ, PLoS One. 4:e6349(2009)., "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection"




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