ABOUT THIS RECORDspecies: Bos taurus
source: miRBase, original name: bta-mir-2311 (MI0011327)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTGAAACTGTGCTCGTGGTGT miRNA* AGCACGTGGGCTAGTTTCAGAC mismatches: 5 bulges: 1 |
pre-miRNA
GTACTGAAACTGTGCTCGTGGTGTGTGCTGTACAGCACGTGGGCTAGTTTCAGAC
dot-bracket secondary structure
...((((((((((.(.((((.((((.....)))).)))).).)).))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ, PLoS One. 4:e6349(2009)., "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection"
GTACTGAAACTGTGCTCGTGGTGTGTGCTGTACAGCACGTGGGCTAGTTTCAGAC
dot-bracket secondary structure
...((((((((((.(.((((.((((.....)))).)))).).)).))))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM SNORA61: 2e-19 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ, PLoS One. 4:e6349(2009)., "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection"
