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ABOUT THIS RECORD
ID:
MNEST033741
species:
Bos taurus
source:
miRBase, original name:
bta-mir-2476
(
MI0011537
)
Taxonomy by NCBI:
Bos taurus
Bos
Bovinae
Bovidae
Pecora
Ruminantia
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCCTGTGGTCTAGTGGTTAG
miRNA*
GATTTTCAACCAGGC
mismatches:
4
bulges:
5
View larger
pre-miRNA
GACTCTATCTGTTGC
CCCTGTGGTCTAGTGGTTAG
AATTCCT
GATTTTCAACCAGGC
AACCATTATTTGATTCTCAGTC
dot-bracket secondary structure
((((..(((.(((((
(....((((.....((((((
.....))
))))....)))))))
)))........)))....))))
SIMILARITIES
miRBase
ssc-mir-2476-2
:
0.0000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
tRNA: 0.000001
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ,
PLoS One. 4:e6349(2009).
,
"Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection"