ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-2902
source: miRBase, original name: bta-mir-2902-1 (MI0013077)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGGCTGTCCCTGGAGGTGGG miRNA* CAGTCTCTAGTGAGAGAGCCATGG mismatches: 1 bulges: 3 |
pre-miRNA
TCACCCCAGTCTCTAGTGAGAGAGCCATGGCGGCAGGGGCGTGGCTGTCCCTGGAGGTGGGACTG
dot-bracket secondary structure
....((((.(((((((.(.((.(((((((.(......).))))))).))))))))))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D, BMC Genomics. 10:443(2009)., "Identification and characterization of miRNAs expressed in the bovine ovary"
TCACCCCAGTCTCTAGTGAGAGAGCCATGGCGGCAGGGGCGTGGCTGTCCCTGGAGGTGGGACTG
dot-bracket secondary structure
....((((.(((((((.(.((.(((((((.(......).))))))).))))))))))))))....
SIMILARITIES| miRBase bta-mir-2902-2: 2e-31 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: bta-mir-2902-2 from miRBase (MNEST033778) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D, BMC Genomics. 10:443(2009)., "Identification and characterization of miRNAs expressed in the bovine ovary"
