ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-2904
source: miRBase, original name: bta-mir-2904-3 (MI0013082)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGAGCCTCGGTTGGCCTC miRNA* TCCCCCGCCGTCCCCGC mismatches: 6 bulges: 2 |
pre-miRNA
ACGGCAGCGCCGCGGGAGCCTCGGTTGGCCTCGGATAGCCGGTCCCCCGCCGTCCCCGCCGGCGGGCCGT
dot-bracket secondary structure
(((((..(((((((((..(..(((..((..((((....))))..)))))..)..)))).))))).)))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D, BMC Genomics. 10:443(2009)., "Identification and characterization of miRNAs expressed in the bovine ovary"
ACGGCAGCGCCGCGGGAGCCTCGGTTGGCCTCGGATAGCCGGTCCCCCGCCGTCCCCGCCGGCGGGCCGT
dot-bracket secondary structure
(((((..(((((((((..(..(((..((..((((....))))..)))))..)..)))).))))).)))))
SIMILARITIES| miRBase bta-mir-2904-1: 3e-34 PMRD no hits microPC no hits | UniProt no hits RFAM mir-689: 0.000000000000004 |
Identical with: bta-mir-2904-1 from miRBase (MNEST033780) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D, BMC Genomics. 10:443(2009)., "Identification and characterization of miRNAs expressed in the bovine ovary"
