ABOUT THIS RECORDspecies: Bos taurus
source: miRBase, original name: bta-mir-2917 (MI0012642)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGACTGACATGGACT miRNA* TCTAGATGTCAGGGGTAC mismatches: 2 bulges: 2 |
pre-miRNA
AAGAGCTGCTATGACTGACATGGACTTCTTCCTTTCTGGTCACACAGAAGTCTAGATGTCAGGGGTACACTTAGCAAGAA
dot-bracket secondary structure
....((((.(((..(((((((((((((((.((.....))......))))))))..)))))))..)))....)))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Long JE, Chen HX, Biochem Genet. 47:329-343(2009)., "Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning"
AAGAGCTGCTATGACTGACATGGACTTCTTCCTTTCTGGTCACACAGAAGTCTAGATGTCAGGGGTACACTTAGCAAGAA
dot-bracket secondary structure
....((((.(((..(((((((((((((((.((.....))......))))))))..)))))))..)))....)))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Long JE, Chen HX, Biochem Genet. 47:329-343(2009)., "Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning"
