ABOUT THIS RECORDspecies: Bos taurus
miRNA family: miR-3431
source: miRBase, original name: bta-mir-3431 (MI0014498)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCTCAGTCAGCCTTGTGGATGT miRNA* ATCTAGAGGACTGACTGAAATT mismatches: 2 bulges: 2 |
pre-miRNA
ATACCCAATGAATGCGAAAACCTCAGTCAGCCTTGTGGATGTATGTTCTGCAGACCTGACATCTAGAGGACTGACTGAAATTTTCACTTTCAGCTAA
dot-bracket secondary structure
........((((.(.(((((..((((((((((((.(((((((..(((.....)))...))))))))))).))))))))..))))).).)))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: qPCR
references
[1] Jin W, Grant JR, Stothard P, Moore SS, Guan LL, BMC Mol Biol. 10:90(2009)., "Characterization of bovine miRNAs by sequencing and bioinformatics analysis"
[2] Jin W, Dodson MV, Moore SS, Basarab JA, Guan LL, BMC Mol Biol. 11:29(2010)., "Characterization of microRNA expression in bovine adipose tissues: a potential regulatory mechanism of subcutaneous adipose tissue development"
ATACCCAATGAATGCGAAAACCTCAGTCAGCCTTGTGGATGTATGTTCTGCAGACCTGACATCTAGAGGACTGACTGAAATTTTCACTTTCAGCTAA
dot-bracket secondary structure
........((((.(.(((((..((((((((((((.(((((((..(((.....)))...))))))))))).))))))))..))))).).)))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: qPCR
references
[1] Jin W, Grant JR, Stothard P, Moore SS, Guan LL, BMC Mol Biol. 10:90(2009)., "Characterization of bovine miRNAs by sequencing and bioinformatics analysis"
[2] Jin W, Dodson MV, Moore SS, Basarab JA, Guan LL, BMC Mol Biol. 11:29(2010)., "Characterization of microRNA expression in bovine adipose tissues: a potential regulatory mechanism of subcutaneous adipose tissue development"
