ABOUT THIS RECORD

ID: MNEST033948
species: Sus scrofa
miRNA family: mir-34
source: miRBase, original name: ssc-mir-34a (MI0008216)

Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TTTCTTTGGCAGTGTCTTAGCTGGTTGTTGTGAGTAATAGCAAAGGAAGCAATCAGCAGCATCCTGCCCTAGAACA

dot-bracket secondary structure
.((((..(((((..(((..((((((((((.((........)).....)))))))))))).)..)))))..))))..


SIMILARITIES

miRBase mdo-mir-34a: 7e-23 PMRD no hits microPC no hits

UniProt no hits RFAM mir-34: 3e-19

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references
[1] Kim J, Cho IS, Hong JS, Choi YK, Kim H, Lee YS, Mamm Genome. 19:570-580(2008)., "Identification and characterization of new microRNAs from pig"
[2] Cho IS, Kim J, Seo HY, Lim do H, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS, Mol Biol Rep. 37:3567-3574(2010)., "Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue"