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ABOUT THIS RECORD

ID: MNEST034183
species: Danio rerio
miRNA family: let-7
source: miRBase, original name: dre-let-7j (MI0003343)

Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTTGTTTGTACAGTT

miRNA*
CTGTACAGACTACTGCCTTGCC

mismatches: 2
bulges: 0

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pre-miRNA
GGTTGAGGTAGTTGTTTGTACAGTTTTTAGGGTCTGTTATTCTGCCCTGTTAAGGAGCTAACTGTACAGACTACTGCCTTGCC

dot-bracket secondary structure
(((.((((((((.((((((((((((..((((((..(.....).))))))..........)))))))))))).)))))))))))


SIMILARITIES
miRBase fru-let-7j: 0.000000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 1e-40

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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deep sequencing data evidence





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