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ABOUT THIS RECORD

ID: MNEST034243
species: Danio rerio
miRNA family: mir-29
source: miRBase, original name: dre-mir-29a-2 (MI0003394)

Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGCACCATTTGAAATCGGTTA

miRNA*
ACCGATTTCTTTTGGTGTTCAGA

mismatches: 3
bulges: 1

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pre-miRNA
AGGTTGACCGATTTCTTTTGGTGTTCAGAGTCTTTTGGGGTTTCTAGCACCATTTGAAATCGGTTACAATG

dot-bracket secondary structure
....(((((((((((...(((((((.((((.((.....)).)))))))))))...))))))))))).....


SIMILARITIES
miRBase tni-mir-29a-1: 9e-19

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-29: 0.000000000000004

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
deep sequencing data evidence





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