ABOUT THIS RECORDspecies: Danio rerio
miRNA family: mir-181
source: miRBase, original name: dre-mir-181a-2 (MI0003387)
Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACATTCAACGCTGTCGGTGAGT miRNA* CATCGACCGTTGACTGTACC mismatches: 2 bulges: 3 |
pre-miRNA
GTTGGTGAACATTCAACGCTGTCGGTGAGTTTTGCGCTTCTGTAACAAACCATCGACCGTTGACTGTACCCTGAGGGTGG
dot-bracket secondary structure
).......(((.((((((..(((((((.((((((((....))))..))))))))))))))))).)))((((...))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
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GTTGGTGAACATTCAACGCTGTCGGTGAGTTTTGCGCTTCTGTAACAAACCATCGACCGTTGACTGTACCCTGAGGGTGG
dot-bracket secondary structure
).......(((.((((((..(((((((.((((((((....))))..))))))))))))))))).)))((((...))))..
SIMILARITIES| miRBase pma-mir-181a: 2.0E-11 PMRD no hits microPC no hits | UniProt no hits RFAM 1mir-181: 6.0E-36 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
