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ABOUT THIS RECORD

ID: MNEST034329
species: Danio rerio
miRNA family: mir-181
source: miRBase, original name: dre-mir-181a-2 (MI0003387)

Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AACATTCAACGCTGTCGGTGAGT

miRNA*
CATCGACCGTTGACTGTACC

mismatches: 2
bulges: 3

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pre-miRNA
TTGGTGAACATTCAACGCTGTCGGTGAGTTTTGCGCTTCTGTAACAAACCATCGACCGTTGACTGTACCCTGAGGGTGG

dot-bracket secondary structure
.......(((.((((((..(((((((.((((((((....))))..))))))))))))))))).)))((((...))))..


SIMILARITIES
miRBase pma-mir-181a: 0.00000000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-181: 6e-36

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
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