ABOUT THIS RECORDspecies: Fugu rubripes
miRNA family: mir-196
source: miRBase, original name: fru-mir-196a-1 (MI0003299)
SEQUENCE & STRUCTURE| miRNA TAGGTAGTTTCATGTTGTTGGG miRNA* CGGCAACAAGAAACTGCCTTGA mismatches: 2 bulges: 0 |
pre-miRNA
AGCTGGAGCGTGGTTTAGGTAGTTTCATGTTGTTGGGGATGGCTTCCTGGCTCGGCAACAAGAAACTGCCTTGATTACGTCAGTT
dot-bracket secondary structure
(((((..((((((((.((((((((((.((((((((((...((...))...)))))))))).)))))))))).)))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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AGCTGGAGCGTGGTTTAGGTAGTTTCATGTTGTTGGGGATGGCTTCCTGGCTCGGCAACAAGAAACTGCCTTGATTACGTCAGTT
dot-bracket secondary structure
(((((..((((((((.((((((((((.((((((((((...((...))...)))))))))).)))))))))).)))))))))))))
SIMILARITIES| miRBase tni-mir-196a-1: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-196: 2e-39 |
Identical with: tni-mir-196a-1 from miRBase (MNEST034769) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
