ABOUT THIS RECORDspecies: Fugu rubripes
miRNA family: mir-199
source: miRBase, original name: fru-mir-199-1 (MI0003358)
SEQUENCE & STRUCTURE| miRNA CCCAGTGTTCAGACTACCTGTTC miRNA* TGTACAGTAGTCTGCACATTGGTTA mismatches: 2 bulges: 4 |
pre-miRNA
TCCTGCTCCGTCATCCCAGTGTTCAGACTACCTGTTCAGGATTTTACTGGTGTACAGTAGTCTGCACATTGGTTAGACAGTGCATGG
dot-bracket secondary structure
.(((((.(.(((...(((((((.((((((((.(((((((.......))))...))))))))))).)))))))...))).).))).))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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TCCTGCTCCGTCATCCCAGTGTTCAGACTACCTGTTCAGGATTTTACTGGTGTACAGTAGTCTGCACATTGGTTAGACAGTGCATGG
dot-bracket secondary structure
.(((((.(.(((...(((((((.((((((((.(((((((.......))))...))))))))))).)))))))...))).).))).))
SIMILARITIES| miRBase dre-mir-199-1: 4e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-199: 5e-43 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
