ABOUT THIS RECORDspecies: Fugu rubripes
miRNA family: mir-199
source: miRBase, original name: fru-mir-199-2 (MI0003329)
SEQUENCE & STRUCTURE| miRNA CCCAGTGTTCAGACTACCTGTTC miRNA* ACAGTAGTCTGCACATTGGTTA mismatches: 3 bulges: 1 |
pre-miRNA
CCGCCTGCCCAGTGTTCAGACTACCTGTTCAGGAAGTAGTGGTTGTACAGTAGTCTGCACATTGGTTAGGCTG
dot-bracket secondary structure
..(((((.(((((((.((((((((.(((.(((..........))).))))))))))).))))))).)))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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CCGCCTGCCCAGTGTTCAGACTACCTGTTCAGGAAGTAGTGGTTGTACAGTAGTCTGCACATTGGTTAGGCTG
dot-bracket secondary structure
..(((((.(((((((.((((((((.(((.(((..........))).))))))))))).))))))).)))))..
SIMILARITIES| miRBase tni-mir-199-2: 5e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-199: 8e-35 |
Identical with: tni-mir-199-2 from miRBase (MNEST034773) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
