ABOUT THIS RECORDspecies: Fugu rubripes
miRNA family: mir-219
source: miRBase, original name: fru-mir-219-2 (MI0003215)
SEQUENCE & STRUCTURE| miRNA TGATTGTCCAAACGCAATTCTT miRNA* GAGTTGTGGATGGACATCACG mismatches: 2 bulges: 1 |
pre-miRNA
TCGGAGCTGATTGTCCAAACGCAATTCTTGCGTCTGCCTTTGTGAAACCAGGAGTTGTGGATGGACATCACGCCCCTGAC
dot-bracket secondary structure
..((.((((((.(((((..(((((((((((..((.........))...)))))))))))..))))))))).)).))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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TCGGAGCTGATTGTCCAAACGCAATTCTTGCGTCTGCCTTTGTGAAACCAGGAGTTGTGGATGGACATCACGCCCCTGAC
dot-bracket secondary structure
..((.((((((.(((((..(((((((((((..((.........))...)))))))))))..))))))))).)).))....
SIMILARITIES| miRBase tni-mir-219-2: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-219: 5e-21 |
Identical with: tni-mir-219-2 from miRBase (MNEST034792) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
