ABOUT THIS RECORDspecies: Fugu rubripes
miRNA family: mir-338
source: miRBase, original name: fru-mir-338 (MI0003335)
SEQUENCE & STRUCTURE| miRNA TCCAGCATCAGTGATTTTGTTG miRNA* ACAACATCCTGGTGCTGCCTGAGT mismatches: 1 bulges: 4 |
pre-miRNA
GGATTCTCCCTGCAACAACATCCTGGTGCTGCCTGAGTCACTTTCACAAACTCCAGCATCAGTGATTTTGTTGCGGGGGG
dot-bracket secondary structure
.....(((((((((((((.((((((((((((...((((...........))))))))))))).))).)))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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GGATTCTCCCTGCAACAACATCCTGGTGCTGCCTGAGTCACTTTCACAAACTCCAGCATCAGTGATTTTGTTGCGGGGGG
dot-bracket secondary structure
.....(((((((((((((.((((((((((((...((((...........))))))))))))).))).)))))))))))))
SIMILARITIES| miRBase tni-mir-338: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-338: 6e-39 |
Identical with: tni-mir-338 from miRBase (MNEST034797) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
