ABOUT THIS RECORDspecies: Tetraodon nigroviridis
miRNA family: mir-1827
source: miRBase, original name: tni-let-7e (MI0003214)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGATTGAATAGTT miRNA* CTATACAATCTACTGTCTTTCC mismatches: 4 bulges: 0 |
pre-miRNA
GCTGTCCTTGGGGCTGAGGTAGTAGATTGAATAGTTGTGGGGTTGTGTGACCTCTATGTGAGATAACTATACAATCTACTGTCTTTCCCAAGGAGACAGC
dot-bracket secondary structure
(((((((((((((..(((..(((((((((.((((((((((((((....))))))........)))))))).)))))))))..))))))))))))..))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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GCTGTCCTTGGGGCTGAGGTAGTAGATTGAATAGTTGTGGGGTTGTGTGACCTCTATGTGAGATAACTATACAATCTACTGTCTTTCCCAAGGAGACAGC
dot-bracket secondary structure
(((((((((((((..(((..(((((((((.((((((((((((((....))))))........)))))))).)))))))))..))))))))))))..))))
SIMILARITIES| miRBase fru-let-7e: 2e-42 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 5e-31 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
