ABOUT THIS RECORDspecies: Tetraodon nigroviridis
miRNA family: let-7
source: miRBase, original name: tni-let-7j (MI0003342)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTTTTTTGTACAGTT miRNA* CTGTACAAGTGACTGCCTTGCC mismatches: 2 bulges: 0 |
pre-miRNA
GTCTGAGGTAGTTTTTTGTACAGTTTGAGGGTCTGTGATTCTGCCCCATACAGGAGCTAACTGTACAAGTGACTGCCTTGCC
dot-bracket secondary structure
....(((((((((.(((((((((((..((((((...))))))((.((.....)).)).))))))))))).)))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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GTCTGAGGTAGTTTTTTGTACAGTTTGAGGGTCTGTGATTCTGCCCCATACAGGAGCTAACTGTACAAGTGACTGCCTTGCC
dot-bracket secondary structure
....(((((((((.(((((((((((..((((((...))))))((.((.....)).)).))))))))))).)))))))))...
SIMILARITIES| miRBase fru-let-7j: 2e-41 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 2e-35 |
Identical with: fru-let-7j from miRBase (MNEST034534) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
