ABOUT THIS RECORDspecies: Tetraodon nigroviridis
miRNA family: mir-9
source: miRBase, original name: tni-mir-9-3 (MI0003452)
SEQUENCE & STRUCTURE| miRNA TCTTTGGTTATCTAGCTGTATGA miRNA* ATAAAGCTAGATAACCGAAAGTA mismatches: 3 bulges: 0 |
pre-miRNA
GGAGCTGTGTTTCTGTCTTTGGTTATCTAGCTGTATGAGTGTTAAATACCTGTCATAAAGCTAGATAACCGAAAGTAGAAAT
dot-bracket secondary structure
........(((((((..(((((((((((((((.(((((((((...))))...))))).)))))))))))))))..)))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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GGAGCTGTGTTTCTGTCTTTGGTTATCTAGCTGTATGAGTGTTAAATACCTGTCATAAAGCTAGATAACCGAAAGTAGAAAT
dot-bracket secondary structure
........(((((((..(((((((((((((((.(((((((((...))))...))))).)))))))))))))))..)))))))
SIMILARITIES| miRBase fru-mir-9-3: 2e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-9: 4e-28 |
Identical with: fru-mir-9-3 from miRBase (MNEST034539) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
