ABOUT THIS RECORDspecies: Tetraodon nigroviridis
miRNA family: mir-10
source: miRBase, original name: tni-mir-10c (MI0003450)
SEQUENCE & STRUCTURE| miRNA TACCCTGTAGATCCGGATTTGT miRNA* AAATTCGCTTCTAGGGGAGT mismatches: 2 bulges: 2 |
pre-miRNA
GAGCCGCTGTCTTCTATATCTACCCTGTAGATCCGGATTTGTGTAACGATCATTAAAGCAATCACAAATTCGCTTCTAGGGGAGTATATAGTGGATTTAT
ACACGACG
dot-bracket secondary structure
........((((.((((((((.((((.((((..((((((((((...................))))))))))..)))))))))).)))))).))))....
........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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GAGCCGCTGTCTTCTATATCTACCCTGTAGATCCGGATTTGTGTAACGATCATTAAAGCAATCACAAATTCGCTTCTAGGGGAGTATATAGTGGATTTAT
ACACGACG
dot-bracket secondary structure
........((((.((((((((.((((.((((..((((((((((...................))))))))))..)))))))))).)))))).))))....
........
SIMILARITIES| miRBase fru-mir-10c: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-10: 3e-26 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
