ABOUT THIS RECORDspecies: Tetraodon nigroviridis
miRNA family: mir-22
source: miRBase, original name: tni-mir-22b (MI0003382)
SEQUENCE & STRUCTURE| miRNA AAGCTGCCAGTTGAAGAGCTGT miRNA* CGTTCTTCACTGGCTAGCTTTA mismatches: 2 bulges: 2 |
pre-miRNA
CGTTGCCTCACAGTCGTTCTTCACTGGCTAGCTTTATGTCCTCCGACCCCACGCTAAAGCTGCCAGTTGAAGAGCTGTTGTGTGTAAC
dot-bracket secondary structure
)(((((..(((((..(((((((((((((.((((((((((...........))).)))))))))))).))))))))..))))).)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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CGTTGCCTCACAGTCGTTCTTCACTGGCTAGCTTTATGTCCTCCGACCCCACGCTAAAGCTGCCAGTTGAAGAGCTGTTGTGTGTAAC
dot-bracket secondary structure
)(((((..(((((..(((((((((((((.((((((((((...........))).)))))))))))).))))))))..))))).)))))
SIMILARITIES| miRBase fru-mir-22b: 9.0E-35 PMRD no hits microPC no hits | UniProt no hits RFAM 2mir-22: 5.0E-43 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
