ABOUT THIS RECORDspecies: Tetraodon nigroviridis
miRNA family: mir-27
source: miRBase, original name: tni-mir-27b (MI0003268)
SEQUENCE & STRUCTURE| miRNA TTCACAGTGGCTAAGTTCTGCA miRNA* CAGAGCTTAGCTGATTGGTGAACA mismatches: 4 bulges: 2 |
pre-miRNA
AGGCACAGAGCTTAGCTGATTGGTGAACAGTGATTGATTTCCTCTTTGTTCACAGTGGCTAAGTTCTGCACCTG
dot-bracket secondary structure
(((..(((((((((((((....((((((((.((.........)).))))))))..)))))))))))))..))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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AGGCACAGAGCTTAGCTGATTGGTGAACAGTGATTGATTTCCTCTTTGTTCACAGTGGCTAAGTTCTGCACCTG
dot-bracket secondary structure
(((..(((((((((((((....((((((((.((.........)).))))))))..)))))))))))))..))).
SIMILARITIES| miRBase fru-mir-27b: 1e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-27: 1e-33 |
Identical with: fru-mir-27b from miRBase (MNEST034566) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
