ABOUT THIS RECORDspecies: Tetraodon nigroviridis
miRNA family: mir-27
source: miRBase, original name: tni-mir-27c (MI0003432)
SEQUENCE & STRUCTURE| miRNA TTCACAGTGGTTAAGTTCTGC miRNA* AGGACTTAACCCACATGTGAACA mismatches: 0 bulges: 2 |
pre-miRNA
GGCTGTGCGGCGGCAGGACTTAACCCACATGTGAACAGTGAGTGTGCCGTGTTCACAGTGGTTAAGTTCTGCCGCC
dot-bracket secondary structure
........(((((((((((((((((.((.((((((((.((.(....))))))))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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GGCTGTGCGGCGGCAGGACTTAACCCACATGTGAACAGTGAGTGTGCCGTGTTCACAGTGGTTAAGTTCTGCCGCC
dot-bracket secondary structure
........(((((((((((((((((.((.((((((((.((.(....))))))))))))))))))))))))))))))
SIMILARITIES| miRBase fru-mir-27c: 3e-25 PMRD no hits microPC no hits | UniProt no hits RFAM mir-27: 6e-36 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
