miRNEST 2.0, an integrative microRNA resource

ABOUT THIS RECORD

ID: MNEST034872
species: Saccoglossus kowalevskii
miRNA family: mir-9
source: miRBase, original name: sko-mir-79 (MI0010156)

Taxonomy by NCBI:
Saccoglossus kowalevskii Saccoglossus Harrimaniidae Enteropneusta Hemichordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

pre-miRNA
CCGAATTTTTGGCTCTCGTTTTCTCTTTGGTTATCTAGCTGTATGAGTGTACATGACATTATAAAGCTAGGTTACCAAAGACAAAAACAGATGCCAGTGA
T

dot-bracket secondary structure
....(((.((((((((.(((((.((((((((.((((((((.(((((.(((.....)))))))).)))))))).))))))))..)))))))).))))).))
)

SIMILARITIES

miRBase sko-mir-9: 2e-39

PMRD no hits

microPC no hits

UniProt no hits

RFAM mir-9: 0.00000000002

Identical with: sko-mir-9 from miRBase (MNEST034865)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454

references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"