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ABOUT THIS RECORD
ID:
MNEST034882
species:
Saccoglossus kowalevskii
miRNA family:
mir-153
source:
miRBase, original name:
sko-mir-153
(
MI0010166
)
Taxonomy by NCBI:
Saccoglossus kowalevskii
Saccoglossus
Harrimaniidae
Enteropneusta
Hemichordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGCATAGTCACAAAAGTGATT
miRNA*
TCATTTTTGTGCATATGCAAGC
mismatches:
2
bulges:
0
View larger
pre-miRNA
TACTAACCTTGCCAGTGGCCTAG
TCATTTTTGTGCATATGCAAGC
TGTCAAATCAATCAC
TTGCATAGTCACAAAAGTGATT
GGGACAAGTGTGCGCACT
C
dot-bracket secondary structure
..........((((.(..(((((
(((((((((((..((((((((.
((..........)))
)))))))..)))))))))))))
)))...).)).)).....
.
SIMILARITIES
miRBase
spu-mir-153
:
0.00000008
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-153: 0.000001
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"