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ABOUT THIS RECORD
ID:
MNEST034899
species:
Saccoglossus kowalevskii
source:
miRBase, original name:
sko-mir-2001
(
MI0010264
)
Taxonomy by NCBI:
Saccoglossus kowalevskii
Saccoglossus
Harrimaniidae
Enteropneusta
Hemichordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGTGACCGTTATAATGGGCAT
miRNA*
GCCTACTGTAGCGTTTACAACA
mismatches:
2
bulges:
0
View larger
pre-miRNA
ACGTTG
TTGTGACCGTTATAATGGGCAT
ATCAAGCACCAATGCAATCATAAT
GCCTACTGTAGCGTTTACAACA
ATG
dot-bracket secondary structure
.(((((
((((((.(((((((.(((((((
.....(((....))).......))
))))).))))))).))))))))
)))
SIMILARITIES
miRBase
cte-mir-2001
:
0.000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"