miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST034910
species:
Saccoglossus kowalevskii
miRNA family:
mir-4818
source:
miRBase, original name:
sko-mir-4818e
(
MI0017553
)
Taxonomy by NCBI:
Saccoglossus kowalevskii
Saccoglossus
Harrimaniidae
Enteropneusta
Hemichordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATTGCACACAATAGTGGGGC
miRNA*
CTTTCTACTGTGTGCAATTAG
mismatches:
5
bulges:
0
View larger
pre-miRNA
TGCTATATTCTATGTTGACGGAAC
CTTTCTACTGTGTGCAATTAG
TGTTAGTTTCATTCT
CATTGCACACAATAGTGGGGC
TTTATTACATAACCATATC
A
dot-bracket secondary structure
..........(((((.((..((.(
((..(((.((((((((((.((
((.......))))..
.)))))))))).)))..))).
))..)))))))........
.
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"