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ABOUT THIS RECORD
ID:
MNEST034939
species:
Saccoglossus kowalevskii
source:
miRBase, original name:
sko-mir-4838
(
MI0017584
)
Taxonomy by NCBI:
Saccoglossus kowalevskii
Saccoglossus
Harrimaniidae
Enteropneusta
Hemichordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCTCCTGCTTCTATCAGTTCC
miRNA*
AACTGATACAAGTAGGATTGTCAGA
mismatches:
2
bulges:
3
View larger
pre-miRNA
ATAATCTGTTGAGGT
AACTGATACAAGTAGGATTGTCAGA
TAACATCCATAATC
TGCTCCTGCTTCTATCAGTTCC
CTCGGCTGATAC
dot-bracket secondary structure
...(((.(((((((.
((((((((.((((((((..(.((((
(..........)))
))))))))))).)))))))).)
)))))).)))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"