ABOUT THIS RECORDspecies: Saccoglossus kowalevskii
miRNA family: mir-4841
source: miRBase, original name: sko-mir-4841-2 (MI0017588)
Taxonomy by NCBI:
Saccoglossus kowalevskii Saccoglossus Harrimaniidae Enteropneusta Hemichordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGATAGTTGTCTTATTCTCC miRNA* AGAATAAGTCCACTGTTGCACC mismatches: 5 bulges: 0 |
pre-miRNA
ATGGAAATGACGTTTTGTGATAGTTGTCTTATTCTCCTGCTGAAAAAACCGAGAATAAGTCCACTGTTGCACCAAGTCATTTTCAA
dot-bracket secondary structure
.((((((((((....((..(((((.(.(((((((((....(....)....))))))))).).)))))..))....)))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M, Evol Dev. 13:15-27(2011)., "microRNA complements in deuterostomes: origin and evolution of microRNAs"
ATGGAAATGACGTTTTGTGATAGTTGTCTTATTCTCCTGCTGAAAAAACCGAGAATAAGTCCACTGTTGCACCAAGTCATTTTCAA
dot-bracket secondary structure
.((((((((((....((..(((((.(.(((((((((....(....)....))))))))).).)))))..))....)))))))))).
SIMILARITIES| miRBase sko-mir-4841-1: 5e-18 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M, Evol Dev. 13:15-27(2011)., "microRNA complements in deuterostomes: origin and evolution of microRNAs"
