miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST034945
species:
Saccoglossus kowalevskii
source:
miRBase, original name:
sko-mir-4843
(
MI0017590
)
Taxonomy by NCBI:
Saccoglossus kowalevskii
Saccoglossus
Harrimaniidae
Enteropneusta
Hemichordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACAGAAAGTTGATTTACTGCATT
miRNA*
CAGTAATTTGACTTTCTCTCT
mismatches:
4
bulges:
2
View larger
pre-miRNA
GGTGGGGGTGCCGGGAA
CAGTAATTTGACTTTCTCTCT
GTGAATTTGAGACAG
ACAGAAAGTTGATTTACTGCATT
TCTGTCACCTCTCTA
dot-bracket secondary structure
((.(((((((.((((((
((((((.(..(((((((.(((
((.........))))
).)))))))..).))))))..))
)))).))))))))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"