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ABOUT THIS RECORD
ID:
MNEST034957
species:
Ixodes scapularis
miRNA family:
bantam
source:
miRBase, original name:
isc-bantam
(
MI0012259
)
Taxonomy by NCBI:
Ixodes scapularis
Ixodes
Ixodinae
Ixodidae
Ixodoidea
Ixodida
Parasitiformes
Acari
Arachnida
Chelicerata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGATCATTGTGAAAGCTGATT
miRNA*
CTGGTTTTCACAATGATCGTCCAGA
mismatches:
3
bulges:
2
View larger
pre-miRNA
GCCGAAGAAACGCCAGACAAAA
CTGGTTTTCACAATGATCGTCCAGA
TGGACCTGAAGTC
TGAGATCATTGTGAAAGCTGATT
TTGTTGATTCAGAGCTT
C
dot-bracket secondary structure
...((((........(((((((
..((((((((((((((((...((((
(.........)))
)).))))))))))))))))..))
))))).........)))
)
SIMILARITIES
miRBase
ame-bantam
:
0.00000000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
bantam: 5e-43
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"