miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST034960
species: Ixodes scapularis
miRNA family: mir-2
source: miRBase, original name: isc-mir-2a (MI0012276)

Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATCACAGCCAGCTTTGATGAGC

miRNA*
TCGTCAAAGTGGCTCTGATGTG

mismatches: 1
bulges: 1

View larger
pre-miRNA
TTTCGTAGACGTCCCACCTCTGTTCGTCAAAGTGGCTCTGATGTGTGTCTCTTTTTTTCATATCACAGCCAGCTTTGATGAGCGGTGGTGAGTCTCCTAC
T


dot-bracket secondary structure
....((((..(.(.((((.((((((((((((((((((.(((((((.............))))))).))))).))))))))))))).)))).).)..))))
.



SIMILARITIES
miRBase dpu-mir-2a: 0.00000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-2: 4e-19

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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