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ABOUT THIS RECORD
ID:
MNEST034966
species:
Ixodes scapularis
miRNA family:
mir-71
source:
miRBase, original name:
isc-mir-71
(
MI0012283
)
Taxonomy by NCBI:
Ixodes scapularis
Ixodes
Ixodinae
Ixodidae
Ixodoidea
Ixodida
Parasitiformes
Acari
Arachnida
Chelicerata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAAGACATGGGTAGTGAGATG
miRNA*
TCTCACTACCTTGTCTTTGTTG
mismatches:
2
bulges:
1
View larger
pre-miRNA
GAGTTTGCAGTGTTGATTCCC
TGAAAGACATGGGTAGTGAGATG
AGTTTGACTGCATTGCCA
TCTCACTACCTTGTCTTTGTTG
GAAATAGCACGTGCAG
T
dot-bracket secondary structure
....(((((((((((.((((.
..(((((((.(((((((((((((
.((.((....))..))))
))))))))))))))))))...)
))).)))))).)))))
.
SIMILARITIES
miRBase
dpu-mir-71
:
0.0000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-71: 7e-27
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"