ABOUT THIS RECORDspecies: Ixodes scapularis
miRNA family: mir-124
source: miRBase, original name: isc-mir-124 (MI0012265)
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAGGCACGCGGTGAATGCCAAG miRNA* CCGTATTCACTGCGCGCCTTGAT mismatches: 3 bulges: 0 |
pre-miRNA
GACCCCTTGCGTGAACGCTCTCCGTATTCACTGCGCGCCTTGATGTGCCCAAACGTATCATAAGGCACGCGGTGAATGCCAAGAGGCACGCTTGCTAATC
A
dot-bracket secondary structure
........(((((....((((..((((((((((((.((((((..((((......))))..)))))).))))))))))))..)))).))))).........
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
GACCCCTTGCGTGAACGCTCTCCGTATTCACTGCGCGCCTTGATGTGCCCAAACGTATCATAAGGCACGCGGTGAATGCCAAGAGGCACGCTTGCTAATC
A
dot-bracket secondary structure
........(((((....((((..((((((((((((.((((((..((((......))))..)))))).))))))))))))..)))).))))).........
.
SIMILARITIES| miRBase dpu-mir-124: 0.000000001 PMRD no hits microPC no hits | UniProt no hits RFAM mir-124: 2e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
