ABOUT THIS RECORDspecies: Ixodes scapularis
source: miRBase, original name: isc-mir-252b (MI0012271)
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAAGTAGTAGTGCCGCAGGTA miRNA* CCTGCACACAACTGCTGACTG mismatches: 5 bulges: 1 |
pre-miRNA
CATGTGTGTTTTAAGTCCTTTAAGTAGTAGTGCCGCAGGTAAGGGCTTGGCACTGGTACCTGCACACAACTGCTGACTGATGAAATCCACTGAAACGCAA
C
dot-bracket secondary structure
....(((((((((((((.....((((((.(((..(((((((.((((...)).))..))))))).))).))))))))))............))))))))).
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
CATGTGTGTTTTAAGTCCTTTAAGTAGTAGTGCCGCAGGTAAGGGCTTGGCACTGGTACCTGCACACAACTGCTGACTGATGAAATCCACTGAAACGCAA
C
dot-bracket secondary structure
....(((((((((((((.....((((((.(((..(((((((.((((...)).))..))))))).))).))))))))))............))))))))).
.
SIMILARITIES| miRBase cte-mir-252b: 0.00002 PMRD no hits microPC no hits | UniProt no hits RFAM mir-252: 1e-28 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
