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ABOUT THIS RECORD

ID: MNEST034978
species: Ixodes scapularis
miRNA family: mir-263
source: miRBase, original name: isc-mir-263a (MI0012272)

Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATGGCACTGGAAGAATTCAC

miRNA*
GACTTCTCCGGTGCTGTGGA

mismatches: 2
bulges: 1

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pre-miRNA
TTGCCTTCCTACCTTCCGTCAATGGCACTGGAAGAATTCACGGGGTCTTGATAGAAATACCGTGACTTCTCCGGTGCTGTGGATGGCGGCTAGGCCGACT


dot-bracket secondary structure
.......((((.((.(((((.(((((((((((.(((.((((((..(((....)))....)))))).)))))))))))))).))))).)).))))......



SIMILARITIES
miRBase dan-mir-263a: 0.00000008

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-263: 2e-45

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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