ABOUT THIS RECORDspecies: Ixodes scapularis
source: miRBase, original name: isc-mir-278 (MI0015941)
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGTGGGATTTTCGTCCGTTT miRNA* CCGGATGAATTTCTCGCCTGGCC mismatches: 4 bulges: 1 |
pre-miRNA
TGCATTATAGGCTCTGATGTGTCCGGATGAATTTCTCGCCTGGCCGTTTCCGGTCCCCCGGAACAGGTCGGTGGGATTTTCGTCCGTTTACGTCAGGCCT
ACA
dot-bracket secondary structure
.......(((((.((((((((..((((((((..(((((((.((((..((((((....))))))..)))))))))))..))))))))..))))))))))))
)..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Peterson K, Unpublished (2010).,
TGCATTATAGGCTCTGATGTGTCCGGATGAATTTCTCGCCTGGCCGTTTCCGGTCCCCCGGAACAGGTCGGTGGGATTTTCGTCCGTTTACGTCAGGCCT
ACA
dot-bracket secondary structure
.......(((((.((((((((..((((((((..(((((((.((((..((((((....))))))..)))))))))))..))))))))..))))))))))))
)..
SIMILARITIES| miRBase dpu-mir-278: 0.00002 PMRD no hits microPC no hits | UniProt no hits RFAM mir-278: 2e-49 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Peterson K, Unpublished (2010).,
