ABOUT THIS RECORDspecies: Ixodes scapularis
miRNA family: mir-67
source: miRBase, original name: isc-mir-307 (MI0012281)
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCACAACCTCCTTGAGTGAG miRNA* CACTCAGTTTGGCTGTGGTG mismatches: 4 bulges: 0 |
pre-miRNA
GCTTGAGTCGGAGGGCCTTCCTCACTCAGTTTGGCTGTGGTGTAACGGGCGCTCGACCCATCACAACCTCCTTGAGTGAGTGAGGCCTCGCCGAGCCACG
C
dot-bracket secondary structure
((.((..((((.((((((..(((((((((...((.(((((((...(((....)))...))))))).))...)))))))))..))))))..))))..)).)
)
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
GCTTGAGTCGGAGGGCCTTCCTCACTCAGTTTGGCTGTGGTGTAACGGGCGCTCGACCCATCACAACCTCCTTGAGTGAGTGAGGCCTCGCCGAGCCACG
C
dot-bracket secondary structure
((.((..((((.((((((..(((((((((...((.(((((((...(((....)))...))))))).))...)))))))))..))))))..))))..)).)
)
SIMILARITIES| miRBase bmo-mir-307: 0.00000008 PMRD no hits microPC no hits | UniProt no hits RFAM mir-67: 7e-30 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
