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ABOUT THIS RECORD
ID:
MNEST034994
species:
Daphnia pulex
miRNA family:
bantam
source:
miRBase, original name:
dpu-bantam
(
MI0012215
)
Taxonomy by NCBI:
Daphnia pulex
Daphnia
Daphniidae
Anomopoda
Cladocera
Diplostraca
Phyllopoda
Branchiopoda
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGATCATTGTGAAAGCTGATT
miRNA*
CTAGTTTTCTCAGTGATCTGCCAGA
mismatches:
2
bulges:
2
View larger
pre-miRNA
TCGGCTTTTAAACCTCGAGA
CTAGTTTTCTCAGTGATCTGCCAGA
TATTATTTGAATTTC
TGAGATCATTGTGAAAGCTGATT
TTGTGGATAGCCTCGAC
T
dot-bracket secondary structure
..((((......((.(((((
.((((((((.(((((((((..((((
.(((.....))).))
))))))))))).)))))))).))
))).))..)))).....
.
SIMILARITIES
miRBase
tca-bantam
:
0.000000000005
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
bantam: 0.00000000009
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"