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ABOUT THIS RECORD
ID:
MNEST034996
species:
Daphnia pulex
miRNA family:
mir-2
source:
miRBase, original name:
dpu-mir-2a
(
MI0012238
)
Taxonomy by NCBI:
Daphnia pulex
Daphnia
Daphniidae
Anomopoda
Cladocera
Diplostraca
Phyllopoda
Branchiopoda
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TATCACAGCCAGCTTTGATGAGC
miRNA*
TCGCAAAGTGGCTGTCATGTG
mismatches:
1
bulges:
2
View larger
pre-miRNA
CTACTACGTGCCGC
TCGCAAAGTGGCTGTCATGTG
TCCCAATTTCAAGTTTAGCGTTTCA
TATCACAGCCAGCTTTGATGAGC
GGGACGTTTTGTGGCCT
T
dot-bracket secondary structure
((((.((((.((((
(((((((((((((((.(((((
.......................))
))).))))))).))))).)))))
)).))))...))))...
.
SIMILARITIES
miRBase
isc-mir-2a
:
0.0000000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-2: 0.000000001
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"