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ABOUT THIS RECORD
ID:
MNEST035020
species:
Daphnia pulex
miRNA family:
mir-263
source:
miRBase, original name:
dpu-mir-263b
(
MI0012231
)
Taxonomy by NCBI:
Daphnia pulex
Daphnia
Daphniidae
Anomopoda
Cladocera
Diplostraca
Phyllopoda
Branchiopoda
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTGGCACTGGAAGAATTCACA
miRNA*
TGGGTTCCCTGGTGCCAGAGA
mismatches:
5
bulges:
1
View larger
pre-miRNA
GTGATC
CTTGGCACTGGAAGAATTCACA
GAGTGCATTACGACAGGTCG
TGGGTTCCCTGGTGCCAGAGA
TTGC
dot-bracket secondary structure
(..(((
.(((((((..(..((((((((.
((.(.(.....)...).)))
))))))).)..))))))).))
)..)
SIMILARITIES
miRBase
tca-mir-263b
:
0.0000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-263: 0.000004
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"