miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST035034
species: Daphnia pulex
source: miRBase, original name: dpu-mir-745 (MI0012227)

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGCTGCCCAGTGAAGGGCTTT

miRNA*
GGTCCTTCCCGGGGCACCTTGC

mismatches: 5
bulges: 0

View larger
pre-miRNA
CCTGTGTTGGGTCGGTCCTTCCCGGGGCACCTTGCTGATAGGTAGTCAAGCACGCGAGCTGCCCAGTGAAGGGCTTTCCGAATCAGGA

dot-bracket secondary structure
((((.(((.((..((((((((.(.(((((.(((((((((.....)))).....))))).))))).).))))))))..)).))))))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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