ABOUT THIS RECORDspecies: Aedes aegypti
miRNA family: mir-2765
source: miRBase, original name: aae-mir-2765 (MI0013490)
Taxonomy by NCBI:
Aedes aegypti Stegomyia Aedes Aedes/Ochlerotatus group Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGTAACTCCACCACCGTTGGC miRNA* CAATGGGAGCTGGAGTTCCCGCG mismatches: 3 bulges: 1 |
pre-miRNA
AAACGTTTCCGGAGCCTGGTAACTCCACCACCGTTGGCGATATTTGACAGCCAATGGGAGCTGGAGTTCCCGCGTGCCGAACGTTCA
dot-bracket secondary structure
.((((((..(((.((.(((.((((((((..((((((((...........))))))))..).))))))).))).)).)))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR, BMC Genomics. 11:119(2010)., "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus"
AAACGTTTCCGGAGCCTGGTAACTCCACCACCGTTGGCGATATTTGACAGCCAATGGGAGCTGGAGTTCCCGCGTGCCGAACGTTCA
dot-bracket secondary structure
.((((((..(((.((.(((.((((((((..((((((((...........))))))))..).))))))).))).)).)))))))))..
SIMILARITIES| miRBase bmo-mir-2765: 0.00000007 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR, BMC Genomics. 11:119(2010)., "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus"
