ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-993
source: miRBase, original name: aga-mir-993 (MI0010597)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAAGCTCGTTTCTATAGAGGTATCT miRNA* CTACCCTGTAGTTCCGGGCTTTTG mismatches: 5 bulges: 1 |
pre-miRNA
TGCGCTCCTCCGTGACCTACCCTGTAGTTCCGGGCTTTTGTGGGTTGAAATATTATACATATATAATCTCATATACGCTTATCAGAAGCTCGTTTCTATA
GAGGTATCTCAGGGAGTGAA
dot-bracket secondary structure
.....((((((.(((..((((((((((...((((((((((((((((((...((((((....)))))).))).....))))).))))))))))...)))))
).))))..))).)))).)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
TGCGCTCCTCCGTGACCTACCCTGTAGTTCCGGGCTTTTGTGGGTTGAAATATTATACATATATAATCTCATATACGCTTATCAGAAGCTCGTTTCTATA
GAGGTATCTCAGGGAGTGAA
dot-bracket secondary structure
.....((((((.(((..((((((((((...((((((((((((((((((...((((((....)))))).))).....))))).))))))))))...)))))
).))))..))).)))).)).
SIMILARITIES| miRBase aae-mir-993: 3e-17 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
