ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-996
source: miRBase, original name: aga-mir-996 (MI0006241)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACTAGATTACATGCTCGTCT miRNA* GCGTGCATGTTTTCTAGTACACG mismatches: 3 bulges: 1 |
pre-miRNA
GTAGGCGTGCATGTTTTCTAGTACACGTTTTCAGTTAAAGTTTCGTGACTAGATTACATGCTCGTCTAT
dot-bracket secondary structure
(((((((.((((((..((((((.((((................))))))))))..)))))).)))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
GTAGGCGTGCATGTTTTCTAGTACACGTTTTCAGTTAAAGTTTCGTGACTAGATTACATGCTCGTCTAT
dot-bracket secondary structure
(((((((.((((((..((((((.((((................))))))))))..)))))).)))))))
SIMILARITIES| miRBase aae-mir-996: 0.000000003 PMRD no hits microPC no hits | UniProt no hits RFAM mir-996: 2e-32 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
