ABOUT THIS RECORDspecies: Anopheles gambiae
source: miRBase, original name: aga-mir-1889 (MI0008309)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACACATTACAGATTGGGATTA miRNA* ATCTCAAATTGTAATAGTGTGT mismatches: 2 bulges: 1 |
pre-miRNA
TGTGGCGTGGATGGGCGGCAATCTCAAATTGTAATAGTGTGTCACCGTTAACGGCTGGACCATTGTGCTGCCATCGTGATCCACCGAGAAAAACACACAT
TACAGATTGGGATTACCCCGTCCATGCTCCG
dot-bracket secondary structure
.(..(((((((((((.(..((((((((.(((((((.((((((.....((..(((.((((.(((.(((....))).))).)))))))..))..))))))))
))))).)))))))).))))))))))))..).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"
TGTGGCGTGGATGGGCGGCAATCTCAAATTGTAATAGTGTGTCACCGTTAACGGCTGGACCATTGTGCTGCCATCGTGATCCACCGAGAAAAACACACAT
TACAGATTGGGATTACCCCGTCCATGCTCCG
dot-bracket secondary structure
.(..(((((((((((.(..((((((((.(((((((.((((((.....((..(((.((((.(((.(((....))).))).)))))))..))..))))))))
))))).)))))))).))))))))))))..).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"
