ABOUT THIS RECORDspecies: Apis mellifera
miRNA family: mir-184
source: miRBase, original name: ame-mir-184 (MI0001580)
Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGACGGAGAACTGATAAGGGC miRNA* CCTTATCATTCTCCTGTCCGGT mismatches: 1 bulges: 2 |
pre-miRNA
ATTCGTGCCCAAAGCCCCTTATCATTCTCCTGTCCGGTGTAGAATTGTTAGACGACTGGACGGAGAACTGATAAGGGCCCGAGGGTCACAGAA
dot-bracket secondary structure
)...((((((...(.(((((((((((((((.(((((((((...........)).))))))))))))).))))))))).)...))).)))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: array
references
[1] Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG, Genome Biol. 8:R97(2007)., "Computational and transcriptional evidence for microRNAs in the honey bee genome"
ATTCGTGCCCAAAGCCCCTTATCATTCTCCTGTCCGGTGTAGAATTGTTAGACGACTGGACGGAGAACTGATAAGGGCCCGAGGGTCACAGAA
dot-bracket secondary structure
)...((((((...(.(((((((((((((((.(((((((((...........)).))))))))))))).))))))))).)...))).)))....
SIMILARITIES| miRBase ngi-mir-184: 3.0E-19 PMRD no hits microPC no hits | UniProt no hits RFAM 4mir-184: 3.0E-41 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: array
references
[1] Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG, Genome Biol. 8:R97(2007)., "Computational and transcriptional evidence for microRNAs in the honey bee genome"
