miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST035402
species: Apis mellifera
miRNA family: mir-932
source: miRBase, original name: ame-mir-932 (MI0005754)

Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCAATTCCGTAGTGCATTGCAG

miRNA*
GCAAGCACCGCGGGAGTGAGG

mismatches: 3
bulges: 1

View larger
pre-miRNA
CATCGCGTTGCCTCTTCAATTCCGTAGTGCATTGCAGATGATTGTTCGAATTGACGAGAAAGAACCTGCAAGCACCGCGGGAGTGAGGTGGCCTCGCGTC


dot-bracket secondary structure
...((((..(((.(((((.(((((..((((.((((((.(..((.((((......)))).))..).))))))))))..))))).))))).)))..))))..



SIMILARITIES
miRBase ngi-mir-932: 0.000000000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-932: 0.00000000002

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: array, RTPCR

references

[1] Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG, Genome Biol. 8:R97(2007)., "Computational and transcriptional evidence for microRNAs in the honey bee genome"




Liczniki na strone;