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ABOUT THIS RECORD

ID: MNEST035696
species: Bombyx mori
miRNA family: miR-2806
source: miRBase, original name: bmo-mir-2806-2 (MI0012455)

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTCTCTAACCGATACTGCATG

miRNA*
TTGCATGTCGGGTTAGAGAAGCT

mismatches: 0
bulges: 3

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pre-miRNA
AACTTTATTCTATTGCATGTCGGGTTAGAGAAGCTGTGCAAGCTTCTCTAACCGATACTGCATGGAATAAATAG

dot-bracket secondary structure
...((((((((((.(((((((((.(((((((((((.....))))))))))))))))).)))))))))))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
deep sequencing data evidence

references

[1] Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q, BMC Genomics. 11:148(2010)., "MicroRNAs of Bombyx mori identified by Solexa sequencing"




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