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ABOUT THIS RECORD

ID: MNEST036571
species: Drosophila melanogaster
miRNA family: miR-997
source: miRBase, original name: dme-mir-997 (MI0005859)

Taxonomy by NCBI:
Drosophila melanogaster melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCCAAACTCGAAGGAGTTTCA

miRNA*
AAACTCATTCGATTTTGATCA

mismatches: 4
bulges: 0

View larger
pre-miRNA
TTATGGATCCTCTTTCAATGAATTTAGTATGCCCAAACTCGAAGGAGTTTCACCTCCATAAGAGCGACAGTCCTGGAGAAGTTATCAGAGCCAAAAAAAT
TCATATGATGATGCATTTTCCGTCTCTGAAAACGTCTTCAGCAGAAGTTGTTTTTAGCGAAGTGAAACTCATTCGATTTTGATCATACTAACGACATTGG
ATGCTTGGATCGGCA


dot-bracket secondary structure
.....(((((...(((((((...((((((((..((((.(((((.(((((((((.((..((((((((((..(((((((((.(((.((((((.(...(((((
.(((......))).)))))..).)))))).))).)))))))..)).))))))))))..)).))))))))).))))).))))..))))))))...))))))
).....)))))....



SIMILARITIES
miRBase dme-mir-997: 1e-107

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
deep sequencing data evidence

references

[1] Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC, Genome Res. 17:1850-1864(2007)., "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs"




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